 | Authors: Amine Heddad, Andrea Krings, Markus Brameier and Bob MacCallum, Stockholm Bioinformatics Center, Stockholm University, Sweden. |
NucPred
Fetching Q9I7U4 from www.uniprot.org...
The NucPred score for your sequence is 0.69 (see score help below)
1 MQRQNPNPYQQQNQQHQQVQQFSSQEYSHSSQEQHQEQRISRTEQHVQRS 50
51 QVTTQRQVQQHHGGSIGGAYVPPSLTHVYAQGDISPPVFEQIFKNARFAQ 100
101 GGNALFEGRLRGNPKPFVTWTRKGAPLLESQKFRMSYNEATGDVSLLINQ 150
151 IGPGDEGEYTCTARNQYGEAICSVYIQPEGAPMPALQPIQNLEKNIYSNG 200
201 YSYTSIEEEFRVDTFEYRLLREVSFREAITRRSGYEQDSQLSQELDRNQG 250
251 PAQAPQISQKPRSSKLIEGSDAVFTARVGSNPKPRLTWFHNGQRLVASQK 300
301 YEISYSSGVATLRVKNATARDGGHYTLLAENLQGCVVSSAVLAVEPAAET 350
351 AYEPKPVDVMAEQLEAGKALPPAFVKAFGDREITEGRMTRFDCRVTGNPY 400
401 PEVFWLINGRQVRDDASHKILVNESGSHSLMITNVTRLDAGAVQCLARNK 450
451 AGEVAIEAQLNVLEKEQVVAPQFVQRFSTMTVREGEPITMSANAIGTPQP 500
501 RITWQKDGVQISSTAERFVGIDGGATCLEIPRVTANDAGWYQCTAQNIAG 550
551 STANRARLYVEVPREQPNYEQRRLNLPRPTKVIEPEPIPGPEIIYLRHVE 600
601 RAKPHLRPGEEDRVYPPPQFIIPLQNVQQTEGGRVHMEARIEPVGDPTMV 650
651 VEWYLNGRPLAASARATSVFKFGFIALDLLSIMGHDSGEYMCRVTNASGV 700
701 AESRAILSVVQRPSIEQSSQNPNSLQYINQLEDYSRYQRTESIDEQLNQA 750
751 PQFIRPLRDLGEFEEGKNVHFEAQVTPVNDPSMRVEWYKDGLPITASSRI 800
801 TAIFNFGYVSLNILHLRAEDAGTYTVRAVNRIGEAISQSSIRVHSRSQVT 850
851 ADLGIPEQQRYIEKVEELEDYRKSQQRRHVQEAAEAIAPPQFKTPIQNQL 900
901 DLREHAHAHFEARLEPVGDSTMRVEWLKDGQPLEASSRITTYHNFGYVAL 950
951 TIKQLTIYDAGTYTCRAYNAMGQDTTVAQLTVISKNEIVSESQHPGGLQK 1000
1001 IQHLEDSSRYGRREEEETYITQAPRFLGPLKGTTKILEGQRAHFEARVEP 1050
1051 QSDLGLVIEWYHNGRSITAANRIQTYYDFGYVALDISQVRAEDAGVYLVV 1100
1101 ARNKLGEAQQQATMIVETRSSIDTSSMHRGLYEKTQNLENKPFVEPQYDI 1150
1151 EEISKSKPVFVTPLSDPKPIHDGKNIHLECRLEPMGDPTMRVEWFHNGRP 1200
1201 VTVGSRFRTYYDFGFVALDIIKATAADSGEYTVRATNHLGTAHTSACVRV 1250
1251 IDHTDVVTETQNEQSLEQIQLLEDSRRRHHQEEDITIMQAPQFTRGLHNI 1300
1301 ETIEGTNVHLECRLQPVGDPSMRIEWFVNGKPVKTGHRFRPAYEFDYVAL 1350
1351 DLLGCYAIDSGVYTCQARNQLGEAVTSCSVRIIAKNDLILETQNESGLQK 1400
1401 IQYLEDSTRHRRSEFVDEVVNIRPRFLTHPKSLTNTREGGHAHFECKIEP 1450
1451 VTDPNLKVEWFKNGRPITVGHRFRPIHDFGYVALDIVHLIAEDSGVYTCR 1500
1501 AVNLIGSDETQVELQCRSGEQIVTVTQNEAGLEQIHYLEDRSRYTRREEI 1550
1551 DESTKQAPVFTTSLKNVEIKENQRAHFECRLIPVSDPSMRVEWYHNNLPL 1600
1601 KSGSRFTETNNFGFVALDIMSTLPEDAGTYTCRAYNAVGEAITSAVAVVH 1650
1651 TKKSIYLESQHETALPRLQHLEDGSKRQRISVQDEFVSQAPVFTMPVRDV 1700
1701 RVAENQAVHFEARLIPVGDPKLTVEWLRNGQPIEASNRTTTMHDFGYVAL 1750
1751 NMKYVNPEDSGTYTCRAVNELGQAVTSASLIVQSKTSIQLETQHEAAMHK 1800
1801 IHQLEDHSRYQRREEEEYTVTTAPVFVTKLIGPSNLVEGQSAHYECRIEP 1850
1851 YPDPNLKVEWFHNGKPLSTGHRFRTTYDFGFAALDILTVYAEDSGEYTCR 1900
1901 VTNNLGEAINSIVLNVTSRSSIIHETQHEEALTKIQHLEDTSRFQRKTDE 1950
1951 EQFHAERPQFGRPLRNAKVNEGAPVHLEATLIPVNDPTMKVEWYCNGRPI 2000
2001 QTGHRFKTTYDFGFVALDILYAHAEDTGTYMCKAKNAIGEAVTTCAVNVT 2050
2051 ANKTLDLDTLDAQRLEKIRQLETYAPPPKPVVEEKGQKPIFLTPLSNLEH 2100
2101 LKEGEHAHLECRVEPINDPNLKIEWFCNGKQLPTGHRYRTTHDFGYVALD 2150
2151 ILYVYGEDTGTYICKATNQLGEAVNTCNVRVLNRRSMILDTQHPDALEKI 2200
2201 QKLESKVPNARTEVGDAPISPPHFTAELRGSTEIYEGQTAHFEAQVAPVH 2250
2251 DPNLRIEFYHNGKPLPSASRFHITFDFGYVSLDITHAVAEDAGEYSVRAV 2300
2301 NALGQAVSSTNLRVIPRGTIISDTQHPEGLEKIRKLESTAPHQRQEPETP 2350
2351 GTRQRPVFTQPLQNIDRINEHQTAHFEARLIPVGDPNLKVEWYRNEKIIE 2400
2401 DSSRITKQHDFGFVSLDISHIRKEDEGVYMCRAVNPLGEAVTTASMRVVS 2450
2451 EASIQMDTQHPDSISRIHQLEKPLAPRPTEPERLFEKPIFTQLLTGPSEL 2500
2501 WEGTHAHFEARVVPVGDPSLKFEWFINGVELQMGSRLRTTHDFGFVTLDI 2550
2551 TAVVPEDAGVYMCRAYNAAGEAVSSTAMKVKTKSNIDGQPLIPESWEAIR 2600
2601 LKEAAMNRVPEMFVDSTPQQAPVFTTHLQSYDKLHEGQHVLLEAQVEPRA 2650
2651 DPNLRIEWFKNGISLTTGSRIRSTFDFGLVTLSINGLRADDSAIYTCKAT 2700
2701 NQVGEAVSTSSLKIEDRHWLQAESLHPDSLPRIGELEAPKEGRPEAPEPT 2750
2751 YETPVFITHLNNIECKESDNVRFECNVEPARDPTMSIEWFYNGQPLQAAA 2800
2801 KFKSIYDFGYCALDLTNSYAENSGVYTCKATNSKGSATTSGTLKCTGGKT 2850
2851 MFLDTQHPQGEAGLEAVQETEEELANRYTSKTTKPETQYPPPVWTKPLQA 2900
2901 EFHLSEAQPIHLEANVEPKEDPNLFIEWYFNGKMLNHGSRFKMTSEFGFV 2950
2951 TMDMIEVYARDQGIYTCKAYNKAGEAFTSTTIFCSSKENIIESTQHPKGA 3000
3001 EGLEQIQDLEDSLRKDGSKPEQPDLGIPPRFTTEFVNIADIGEGELAHFE 3050
3051 ANLIPVGDQSMVIEWFYNGKVLEASHRVRTIYAFGTVALEVLGTKIEDTG 3100
3101 TYTCRATNKHGTAEISCNLECVDKPRGQKPRFTSHIQPLEGLKDGQSAHF 3150
3151 ECTLIPVNDPDLKVEWYHNGKLMRHSNRIKTVSDFGYVVLDISYLQDHDS 3200
3201 GEYVCRAWNKYGEDFTRTTLNCGGRGGVFYDSLQPDSLQRIRELECPQGQ 3250
3251 QADTSAPLVAEPPKFITQIVDVTKLVEGQSAHFEARLTPITDPDLVVEWY 3300
3301 FNGKKLPHGHRFRTFHDFGIVILDILYCYEENSGVYEARARNKYGEDVTR 3350
3351 ASLKCASKSSLILDSQLPRGMEGGLEKIANLEYSMVRTREETTEETKGKA 3400
3401 PVFTVPLENIENLREGENAHFEARITPADDPKLKVEWYWNGRPLKAGSRF 3450
3451 RTFCDFGFVILEISPVYPEDSGEYSCRAINEYGEAVTTATMKIQGKRSII 3500
3501 MESQLPKGMEGTIDRIAELEGLGSRSTEFVPDDDTGKPPEFITSPFDMVI 3550
3551 GENALAHFECRLQPINDPSMRVDWFHNGKALWAGSRIKTINDFGFVILEI 3600
3601 AGCYQRDSGLYTCKATNKHGEATVSCKLQVKGRQGIVMEPQLPSNFRTGT 3650
3651 ESLQKLEETMHKREELVTEDEQPNPPKFTEEIKDNLDVPEGGPIHFDCRV 3700
3701 EPVGDPTMRIEWFYNGHVMATGSRVHQLNDFGFIALDVDYIYARDSGEYT 3750
3751 CRATNKWGTATTSAKVTCKGKHNIVYESQLPEGMTSEKLKELERGRIPEA 3800
3801 PKVVEEVFGPPKFTTQITSVTVDEAEAVRFECQVEPKTDPSLRVEWYRNG 3850
3851 KPLPSGHRYRNIFDMGFVSLDILYVYGEDSGEYVCRAINNYGEDRTRATV 3900
3901 SCKKLPTILLQNQVPRGMKRSDALTQMEATIKKYTSEVHLTEDDLFDPDR 3950
3951 KQPPRFVTQIKEQLTLTEMAVTKFECQLAPVGDPNMKVEWFFNGKPLLHK 4000
4001 NRFQPIYDFGYVAMNFGWVYPEDSGEYVCRATNLYGKDETRAIIKVSGKP 4050
4051 GIVYDSQLPAHMQSIDRIREMEASWQVVPDEVDPDAKPRTKPVFVSKLEP 4100
4101 QTVEEGDPARFCVRVTGHPRPRVMWLINGHTVVHGSRYKLTNDGMFHLDV 4150
4151 PKTRQYDTGKVEVIARNSVGESIATTELKVVARSDDYRNVLKNSPRPWYD 4200
4201 YELAAYQKERQENELEKVFDERKQVLSEQSSHTLKGVEHLKPKQYKPPTP 4250
4251 DWQQNVKAKKSEDYYNKLQTLETEQLLKETNLRRDTHQYAIPGEKVVSSS 4300
4301 QAKGMAQSYEENLQEKTSTTEVQAAPPKGIAQPSESSVHGREVHMNKQQQ 4350
4351 VQKEIQGDLEITRKITATETTEVEHKGTIQERVVQGPVKPAKAPVFTKKI 4400
4401 QPCRVFENEQAKFEVEFEGEPNPTVKWYRESFPIQNSPDLQIHTFSGKSI 4450
4451 LIIRQVFVEDSAVFSCVAENRGGTAKCSANLVVEERRRAGKGGIQPPSFV 4500
4501 TTIQSTTVATGQLARFDAKVTGTRPLDVYWLKNGMKIQPSIKFKMLEEDS 4550
4551 VHTLLIIEPFAEDSGRYECVAVNAAGEARCDGDCIVQSPSKPEKPTTPGS 4600
4601 EKAPHIVEQLKSQTVEEGSKVIFRCRVDGKPTPTARWMRGENFVKPSRYF 4650
4651 QMSRQGEYYQLVISEAFPEDEGTYKCVAENKLGSIQTSAQLKVRPIENLD 4700
4701 APPTITALKDVSVTEGMPAQFKTTVTGKVKATSVQWFREGQLIPETPDFQ 4750
4751 MIFDGNSAVLLIGTTYEEDSGIFTVRVTSSTGQVESSAKLTVKKRRISAF 4800
4801 QLRTIDSAEDESSSSGREDSAPESPHAFQPGQQPGQQFGQFLGVNGQGQH 4850
4851 QGRSRQKKPKVRSKSLQPATKVIPWRKSSRPTRGRSLDKGVFLPGFKPEP 4900
4901 VKSWTEETINLKATPIEKKKPAPKLEAAKVVLKSIKTERDQGIMSLGATL 4950
4951 EQIIAGKTEKEAIPWITMREKLKAVESVQQQLNKFDLDEVYLQPLEGQIE 5000
5001 TEGQLPQQAQVEQVQRTKEIQRLKSMESVEIMEMTDQIDKLITQQQNAKD 5050
5051 LIPWKEMRQQLKSVQRVTKQIDKFKIEEVELRHLQAQQAITEEYQTGTAE 5100
5101 ETVVMIDESSKGSISKVLRRDEQLQYEDQSNIYKQKFITTEDVNIMHVSE 5150
5151 REKLEAQRLIREQQAVNWRQQQQRPQLQPLTSVEDTVISQTSERQKLVQQ 5200
5201 QSFIEEAQRQQFVQVEDSQMMSLEEYEHQKIINQRTQQEAFSWRQPREPQ 5250
5251 KFIQVEDSTLLHLQERHDTQEQQLLQQQPVMWDRGRKKPDQPQYVQPQEQ 5300
5301 RVKEEFVEKPKTYEEMHDELVEPTPIEQPQPVPVMWERGKKKPQPQEKTF 5350
5351 EEAHDELVEPTPVQQPEPVPVMWERGKKKVAQQETVLSQEVVQTSQVVEQ 5400
5401 QIVEETKKTAVRRVIPPREPEQKVEQVTLKPTPRPRPKEAVKAEEIQLKP 5450
5451 LRSTRPVPQPVEAEQKAYEEATDELTEEPIPQPQPVMWERGKKKPQKPQE 5500
5501 EVTEIPKTLEIAVDTLEEEVPKPTEPQPQPVLWARGQKKPQKPDEQKQEL 5550
5551 PKSLEIAVDTIEEDLIKPVQPEPQPVLWERKKKKPQPQDVIEEKLDVAPT 5600
5601 KTYEKAVDVLPDEPKVEEKPEPVLWQRGKKKIPKSEPTEEVHPDEVDAQI 5650
5651 ETVVKEDEMIVEEKRRIKKTKRPKSTKEVTEELFEEQPEEEISPEEEVPQ 5700
5701 KEVIEEIEEIVEEKRRLKKTKKPKLTQQVTEEETPHEEIIKESEEVVQEQ 5750
5751 EEIVEEKKKVKKVKKPKTVAEKQLKEEEIPTEETVEEEETAEDQQLVVEE 5800
5801 SKKVKKVKKPTGTVEKTDVEELPGEEVPVEEVPVEEVPEDVAPEEELIEE 5850
5851 QEEIVDQDEIQEQKRKVKKAKKPKKTIEKTEIEIEEDQPEEEVLQEEIIG 5900
5901 EQEEITERQRKVKSIKKPKKVVTEKTVDQTEQPEKPEESQAEEVKETVTE 5950
5951 EPKKPKPAPEEAKVEQVEKISLKPAPRKQRLLPEKEQVEEVLLKPVKKIV 6000
6001 AVSEAEQPETPETEFEVKEFAITTTEDILDVTKKRVKKKKPKTKVAAEES 6050
6051 TEEPAEETEEFEEEATQPEEVQPVEEIPEEPQVKEVADERKTAPKPKPRK 6100
6101 EEIIEKVEEVALKRVTRPKKELPQEATIEEVRLKPTQRTSIKPEEVKLEE 6150
6151 VDLQHVEKKEDEIVQEEKRKTRKVKKPKHEDLPEIPDAEPTQLEEAEHIE 6200
6201 LEKQPKPEEDQPQVPWKRGEKKQPVEEVLEEKKWPSGKRRPLPEQQPEEV 6250
6251 QLKPIPSKPIEEQQKPEKAIPGPQLVPEEKPESEEEELELEPLKLPEDKK 6300
6301 PKEPKAKKEKKKKPKLKKATPSVDEVSEEVAEPFDEPIAEEDEVEEMPVD 6350
6351 DVKVVAVSEDVLPEEEVVPTEETPEAKQKAHKKRTKRLKEASVEGQPQLL 6400
6401 EAAIAEIEKVDEISQEISQKTITLLKKTEDTRPQFITTEQLIELDVEDVR 6450
6451 RDLEMKVTSNIIKKEKRRVVLDDSQPLPELELITQKRIQEGIDKVADEEL 6500
6501 IEDQQLIQNQQETTTSEVIGQERKLVKKKKKEIKPPRITEKLRPRQCVPE 6550
6551 EPTVLECKVEGVPFPEIKWYFNDILLFASEKYEITVMEQVAKLKIAKVTP 6600
6601 SDVGVYTCEAKNEAGVATSRTNIILEKEQGVPPQFTKPLKIEFIEEKQPE 6650
6651 RLKVTVTCQVTGKPNPEVKWYRGIEEVIPSETVQMFYDEKTGDVALEVIN 6700
6701 PTPNEAVVYSVQAQNQFGRAIGNANILSRVDEVPREILKAPTVTPLSAVV 6750
6751 VPTGGTLFFEAKYDGLPRPEVKWMRNGREIIENEETIIETTETTTTIKVV 6800
6801 NMTRKRTGKYEVWAKNKVGEAKSSGSVVVSDQKPDEQIKPPRFIQPLEPK 6850
6851 YFGEHEVAIIEAIVESEPLSSFQWFVHNEPIKSSNEVRIVSQANKSTLLI 6900
6901 ENFQSKFVGPFTCRAENVGGSVTSTATVNLIPQEEAEEFESPRFVEELVQ 6950
6951 PVEVMDGEALLLTCQVTGKPTPKVEWYHNAEKITENKETTISQDLQGVCQ 7000
7001 LQITEVFPENEGQYECVATNKIGKSVSKTNVKIQAFEYIPDSEITGLTGS 7050
7051 EEDLLDRTLSIDEQAPKIIKKLPEKIEPKEGEQAKLEVKVVGKPKPKVKW 7100
7101 LRDDEQIFASEEYQIENFEDGTSVLVINHVYPDDLGTISFEAYNPLGVAV 7150
7151 TTALFAVEGIVGSKDYRKPEWVSQMEEMQVALKAAKCSPSLLNEMRDCRA 7200
7201 ALGETAKFSIQFAGNPIPDIQWYFNNVQLRASEKYRMVVQEQEATLEIMK 7250
7251 ITSEDCGYYNCKLINEIGMTMTRAKFDISSTSTIVEETKAKTTVKKKSGK 7300
7301 KTMVKRSGASESQNVQKTEIRIIPTSAVETSMNVIKVKQPVSVLVEKSEI 7350
7351 SEVLVVKDREVADAEERSSQLIEEIEEEEEIEEKVQHDEEDEVEVQVEQK 7400
7401 ETYTSSKKIEITKTVELIRTKISEKIITIEDVQVLSHHEEVQWLLESIEA 7450
7451 ESFGQIGESALRDLATIGLLLRYGCEHYEITYMYEQNIFISLKKPESQSA 7500
7501 LVQLVEREGHEELISQILSESSNEDETILAATVGFKAFIRMIQTYEITIE 7550
7551 IVIRKFVREDFISQDWKICGKERIVETSQIIESHEAITHVKIETATTKVE 7600
7601 KLFKKQEQEHVQNLEQQEQVKIQVQTKQIAQMNTKIKKHKKHKQQEQEVS 7650
7651 ETTIQCEQKETLAHETSAELPQSETLEQIEESLSTYETLPIQNLSKDTLQ 7700
7701 TVAVSVTTELSTPSPTASRVQEEILPQKVLAINEEVLPLDEFGLRKESPR 7750
7751 PKENKLTENIEVRLKHALNVSHAKTAESSKELPSKIPKSVKAQRKMKESR 7800
7801 SLVVEAPNAEEAIEDLKPLKAVSQEVQSDILFSHEITEEQHQALETIEKL 7850
7851 KPTSAIEDTVQQKLLSQEELIIAEVLPSETVGRDVTDVRPPGETISPRLT 7900
7901 PNMSLCITECQPEDSIGEMQQAAKERMETPSMSVTESKAVGGQELEVLEN 7950
7951 VDHMPLITQPTKGLADYTIKAEEVPVQVQEIITFDSLERETVAKTQTAKS 8000
8001 NALELFELSEGLVSSTADSHSPIAEDLPIFEKDVKEATIDMQMQHHVTTS 8050
8051 ETVSNENAVKDLKAVDTPKMAEGTLGQSSALTIGETQQMNLVETTVELIE 8100
8101 PNVESTKPAKGALTEAYGTAESNEETLLESLGLVPDDNRKIEQGKVNISE 8150
8151 GEYVAKVQTTTVTDTEGEFVSVAPKLVNPKFDFVEQSALQIKQDTTVEKE 8200
8201 EILSSNIELAPQLATSNMFPAELKVTSIYEVQPGLTSSDIITEQTKSVSA 8250
8251 NQVFETMSIGVTSKPDMLESTSHIDAFQHPEFKTGDTILDENQQPLEVTN 8300
8301 VQITESSTDIIDVLPNQKLTKAETVTDGFKYAEGLVVLPMESTIDKTEDT 8350
8351 KPTAVNADISMHQQFGTDVREQEPLESTLTRTEDLKPQTQTTESQFGLLQ 8400
8401 SLETSSCVTLEGESVLSVKERHPEQSAAIGTSSALQVANITRPQHMESLD 8450
8451 RLDEQKVPYYQANVNIGEITLPNVEKIDSFDVLSDLNTPDYNKSSKGRVQ 8500
8501 LIESTTSLKTTTAVVSESTEELKDLNITQPVHIKPKPYESDQKISISEQT 8550
8551 NVLEHVSSLNPVLPALETIQSSIKSLHEINVRETDILEKEESLKDVDHIS 8600
8601 GRLAKIILDCTTGIAQVRQEETLEHEEDLKAPLIPLEKAIPASSELHRLP 8650
8651 LTEYVQEQQGTSDMTDFKVSNKCASPNIDHLYETKSSEMIVYDSSINSVD 8700
8701 SEFPAGIVPQKSLVPFRHTMVTENVAFNASENFEILSADQQIATNVQDSL 8750
8751 SQSIIAEDQIAFETEQNLGLETTPTHKPKLLKDDQNLHAKLVDEATVYEA 8800
8801 MGQEQKVDKYNIQQAEITHDLPQVYATDLQQTFEAEKEITTREQSYVAAT 8850
8851 TDIIPSRLGLAMTTKTHPVEGIDVLLSSPPKPSLAQTNYEETQHEVRVRE 8900
8901 TQAIEESEELTDGRLLPVSAVESIDSTFKVTSDSQQPPVFDKELSIPTVS 8950
8951 PLEARAKPSLNLLQGTTTFDVIPLESSVLLKDTHVAVQKAQQEYVAQVES 9000
9001 NKVHVQMDNLVMHKEDIFENAEIENFCKPITEGTQLETVVIEVVPIDNVG 9050
9051 GIHLAPQPSTLLATLTSTDIVNQSHVIDTQVPLEMESEAQAPLDNIAQAR 9100
9101 IKSAEDHVHTNVSEVNVYEQTKAIQDQNKHGLFVKVSKNSDTSKAYLTTI 9150
9151 QSTFLKEDILPKPNILQDTAQAAADELQSLVTEEVVSVSSIQETYELKIP 9200
9201 LQKTANLTQQTPQNSVNVCQQLAYEETPDIAFEPHALTRATTSSVPTFLK 9250
9251 PAENATVNIYENIEGHGDFKPGTVNLTSNSNLNSELVVSVVQEVTSVPSL 9300
9301 GSLATVEPQELKAMPVTKSSTNLAYSEEVKGNKQEFTKIETVEEDDKQPE 9350
9351 TTVTVEELPYEEEKPEEIQELPEEVCVVETVTEDGKPKKKKIRTRVIKKV 9400
9401 KGDKQEVTKIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVE 9450
9451 TVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEV 9500
9501 PYEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTRFIKKVKGDKQEVT 9550
9551 KIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVETVTEDGKP 9600
9601 KKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYEEEKPE 9650
9651 EIQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEED 9700
9701 DKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTR 9750
9751 VIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEE 9800
9801 VRVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETAEEDDKQPETTV 9850
9851 TVEEVPYEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGD 9900
9901 KQEVTKIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVETVT 9950
9951 EDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYE 10000
10001 EEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIE 10050
10051 TVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVETVTEDGKPKKK 10100
10101 KIRTRVIKKVKGDKQEVTKIETVEENDKQPETTVTVEEVPYEEEKPEEIQ 10150
10151 ELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQ 10200
10201 PKTTVTVEEVPYEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTRVIK 10250
10251 KVKGDNQEVTKIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRV 10300
10301 VETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVE 10350
10351 EVPYEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGDMQE 10400
10401 VTKIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVETVTEDG 10450
10451 KPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYEEEK 10500
10501 PEEIQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVE 10550
10551 EDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIR 10600
10601 TRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELP 10650
10651 EEVRVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPET 10700
10701 TVTVEEVPYEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVK 10750
10751 GDKQEVTKIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVET 10800
10801 VTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVP 10850
10851 YEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTK 10900
10901 IETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVETVTEDGKPK 10950
10951 KKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYEVEKPDE 11000
11001 IQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDD 11050
11051 KQPETTVTVEEVPYEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTRV 11100
11101 IKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEV 11150
11151 RVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVT 11200
11201 VEEVPYEEEKPEEIQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGDK 11250
11251 QEVTKIETVEEDDKQPETTVTVEEVPYEEEKPEEIQELPEEVRVVETVTE 11300
11301 DGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYEE 11350
11351 EKLEEIQELPEEVRVVETVTEDGKPKKKKIRTRVIKKVKGDKQEVTTIET 11400
11401 VEEDDKKAETTVTVEETELSAPSVGKVQLKKRVIVQKPEDAVTVFELPER 11450
11451 KSVILSEKEDGTPTKTVIKTRIIKKIQGPNMEVTKVQTVEEYEKAPQTIV 11500
11501 SVEKFNTPFPELPEERLSEVVMLPDEVFESEAVDEEGRLKMIKTKKRIIR 11550
11551 KPALDNTEEVTEIGIIEQDNVEPIYSVKIQERPLTESKPEDSKLIELPEH 11600
11601 VTELNVILPDGKKKRRTVKSRAFKKSLDDDLDEVTTIHIIEEEDKEPLTK 11650
11651 VNIEVVPSDEISITPIPIEELPEETVFTEELDENKKPKKKTTKTRTFKKR 11700
11701 GPDDDEYFQIQTIDEEGKEPISLIRVVSDENIADIIDISKLDDEKVLKHK 11750
11751 QKPHKHKDQYYKEYTITEPEEASADALQKPTKDKTPKQKKTLETPIEEVD 11800
11801 ETVIIDEGTGEQTDQIAIKRKPRKVQGNVQVEAVDEKPIEKKEKAKKKKV 11850
11851 VKTKRDEMDDYIQFLIHQEIPKTVLQPYQRTEMELPQRARRDSSFKQPVK 11900
11901 LTPMKIEKVEFKKPKMVEISSVVEFPQMLKLKAPKQRPQEEKKKKNEASF 11950
11951 KNKKLKSWIRFVPYAPYCFPYVVTELETNREVGELSRNVDEAEEVLKLRP 12000
12001 KKFKHSKPEKAELEEADLGAYESDHSDKSNKELLHPKYKRGKKEKIETPD 12050
12051 ESRKLKFGKGKVPQNEEASEEVNLKPVKLDIAEIEDAEMPVRTQEEEVVK 12100
12101 KKKPKKSSKPEEGLQFEPIEFEEMERTSDIREESDTSVSVDTSTQEKPIY 12150
12151 KKKKKVTPSPQKNQYKILPGQPREFEETPEDDLNLRKRQGERPDDDKADT 12200
12201 KLKPFYKFEVLDLEPEGVQAETVPLSETIAKEPKKKRKIKVKTEQEDNTI 12250
12251 EIVPLSPEDNDEQIFEITVTSSEIPQGDAKAKTIGKKKVKRMNKQELDDF 12300
12301 VTELQEEPNQEVYETRMSDFYEVKLTELPSEMDSDKPTKRILRHEKGDEV 12350
12351 QVLEIVESVVAPGEEPFYEINVISSANTEGDSEEITTDKIKKKSRKIKKD 12400
12401 DLDAYIQQLINAEIPVTELEKYEKIDVDGKAKKPKKLKAKTKKPIIDEGE 12450
12451 TLQVGVTEHEPTKKLKTKKPEEKKNVIEKELAEHEAVPEYDEFLINKTES 12500
12501 ERPQEKRVEETEKDIVPIVDKVLADLNDCLPFVVVEEDLKDMPLATDVIA 12550
12551 LEDEKIIRKRKVRAKKDSKQYEIEIIETEKPGDIPDEARVIVITTEVSGD 12600
12601 TIDGPAPSTTEAPKKSVRKVKKEKLKEFIVNIVEEAPLDHVSEIYEDVLR 12650
12651 TPFRESSEKEDIPSFTTTVVEDEIVNPVLPEKIKTVDDVRVPKDKKKKID 12700
12701 NQKKIKISEFEPTPTSEDSTIEEYTPKLSEHDEDLQTDEYSVDVKDSLPK 12750
12751 SKKKSTKKQKKESLPGPISLYTIRIEETTPEPITEKIYEDGKEVVRVINK 12800
12801 RRIKKKAGPKEYLIEVIETYEDNNPEADVVIRTIETTPSIDSKPQEDHKI 12850
12851 QVVQEKKPKTESLDNYIQKLIDQEIPQVDHKEFKATVLETSPESKKAKKI 12900
12901 KKHHKKTTEVIDGIPITVIEVTIQETETDDEDFKPDEVTLKEIDHENAEE 12950
12951 APKVLKSKVSEEKPKSKKEKSLEFKIAEEDKPKPVLEDISEDVQVVQIIE 13000
13001 EDGTPKQVEIKKKKVSRKHGPKEQVFEITETKAIDEPLSEVTVVEITDEQ 13050
13051 PQEEVLPAQEKKPIKKQKKLKPEDVNTYVVKVLEELTEPTQFETIPEDAD 13100
13101 DKPQPVIEDISENVQVVQIIEEDGTPKQVEIKKKKVSPKHGPKEQVFEIT 13150
13151 ETRPSDEPLAEVTIVELTEEGLNKDIVIPQEKKTVKKPKKLKPEDIQSYV 13200
13201 IRVLEEFNEPQWPASTEKPIIEDIAESIEIVPVTEEDGITKEVEVKKKKV 13250
13251 SRKQGTKNQVFEIIETKTSDEPLAEVTILELSGDKSQEVTILPKEKKPIK 13300
13301 KTIKLKPEDVESYVVNVLEEFCEPQSFESPEPTEGEAHETKTKTKKPKKP 13350
13351 IVKAPENVILIEEMAPETVIENIVNEIGEEVKQVKTTKKLKKKEGPKEYL 13400
13401 IEIKETYEENKPEGDIEITTTELVPEGSPDASDDQPVIVVQKIKKKKPVK 13450
13451 DDLDKYIQQLIEQEITKTPLEEYEPTEMDSKKKPKKKVKSHNKKTIEVID 13500
13501 GLPVTIHEFNVEDIVSEPEDMETPKTLLDEIKEIPQLPDDSSKYLVNISD 13550
13551 EFGEADKPIKQPTQDQPIKKEKPLKKKKDVEYPVSLEAFDHTVKVVSEPT 13600
13601 LEGTVKEVTVKKRKVSRRKGSKDHIFEITETTSEDRPTAEVTVVELSSDE 13650
13651 VLDSEEKPKHERKIVKKPKQLKKDDVEEYIINIIEEFIQPIPVGLVEDEV 13700
13701 EKVQKEETKKPKKSPITYIATEQEDNDNNYDALVKEDLDQPIERALEKPS 13750
13751 SPLEYTISVEEDSVGEEQKQPKPKKISKPKSIKQPSVDKSPDYLVNVISE 13800
13801 ESIIDEPIPEDYVVTEAAEEKPSEEPTFKVEELETEAVEKEVTDDDKGET 13850
13851 TKQSVTKRKIKKLVGPKEEIIEIVETKTGDTPEYEVIVTTEEVQEKSKEA 13900
13901 PEEKKAKTVRKAKKIPKDDLQDYIQKLIEQDIPKTELEKYEKIDLDEPVK 13950
13951 MKRKPIKKVKQSEEQPKEETEEPIEDKPVEKISEYSEVDSDEPKLTVAVK 14000
14001 EFIPEKPEEKPFEIVVLEETVESKREPDEEGKVREKVVKTKKIKQNRGSV 14050
14051 EVVHDIVEEIDTDTNESVITVTTTVPTETPDQDQPSVKQKRTKKIKKDEV 14100
14101 EDFVKRVIEEEAPQPEGSVDLVVIEDFVPKPSSEKRKKKPIKDKHTSVEE 14150
14151 ETPHEDEVLLIESVPEDSPLSDDLITVVDSVPIEEEPENKVNQIEDTKKP 14200
14201 EKKKKPKPSAKILEENVPEDTVEKPLEALHTDSDLEKPDVQEFSISIKEE 14250
14251 EQKHTHPEKKKSSKISSEQPKQPSTEQYEISVTEHDLKPEEEKPFTVQVI 14300
14301 QSETNVEETKDDTGKVHKQVTTKRMLRRPAGEGEIEIIEVVRDDQPEAEI 14350
14351 TIVEYEPEPVNQDEKPKEPKKKTRKVKKDDIHDYIQKLIELETPKTELEK 14400
14401 YEKIEFEPIVKDKPLDSPIDVLDESPKEVQKKDKKSRSTKVPNEETPVQE 14450
14451 QYAKVNVVEEEAPEQPEIPVQILEVKPVEVDVKEVITEDGKPVQEKTTKR 14500
14501 VLKKIGPEEQTTFKITMIESEDNDSVTVIVDEEPEIASPQSIEEHPEQSK 14550
14551 EKLAPKPKKTVRKVKKDDLSDYVKKLIEEEIPKVDLEKYEKVEMPEKPVK 14600
14601 LTVSDSIPEEPKPDKSQPISVLPDTTKPKKTKTPKTPKTEDTDQQVPDEP 14650
14651 TETTVDTTDIPELTPTQTAQPEDTATAQITPSAQEEKSTQDDTKDTIQKT 14700
14701 VKHKKTKPDTQKSVETSELPEVHKDYQISIIHEELVEEEQPEKILEVRVI 14750
14751 DEVAEVEESQPIVEEVEDEEPQPATEETVEDVTKPKSKKKKVVKKKTDDH 14800
14801 DELIKKMLEQEIEKTELEKYEKIEFDVPKKLKPEFAALEPIKIERKEQKP 14850
14851 TKVTILDATDVPKTVKLKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPP 14900
14901 APLIPKTTDIGAIKDNGELSRNIEEAEEILKFKPHKTKKIKKIKDDLEKV 14950
14951 ELEKYEKYISSEEEPEEKTPYKKPEKAPKPEEKQEDVKLKLGKGKKKPKE 15000
15001 EEAPENVTLKNIPQKPQEVEEEVELKQKPKEVEIVEEQTKKPKDGEFVVE 15050
15051 PFEPSEFDRPEYVPDELEQIEHPEIPEKVKKPSKTKYKPKDKSKSEPETI 15100
15101 VSEIVAGVPKEEEAIPEQDVKFRKPERDAPEETDSEIKLRPVPQASKDEN 15150
15151 PDEQALVTPKAEEPIPQEIEDKAIDDEKKPKKSKPKKVQPKEQEIAKEEP 15200
15201 EEFEVSVKEEEALVDKPIEIEKPKDVKVKEKKPKEAPVSEVVVIEEEPKP 15250
15251 EEVPEEIPVEYKITTTVLEPEDAPKEHQVKVIDFDERQETTEEVIEEKVV 15300
15301 TRKKKPKPQQPEEFEVTLKEPKEEQIQPDVVSAEISLPIEEPEQKPEQYE 15350
15351 VELKITQTTPEEPNDVQIAVKEKVKTKPVKKVKEDKIVVVEAEEEKQPVE 15400
15401 ETIVEVEKQEEKKKSEKPKSYEFKISETQSIEEKPIEVAEEAPEETPKVV 15450
15451 EKKVAEKFDSYEFTLKETDEEKVITVDDQPEEEAPVEVVFKKKPKEPEAV 15500
15501 EAEFVMTEPKIVEETSVETAIKQKKTKKPKKDEEEAQLAIKVVESEAPVA 15550
15551 EEVFSEAPESKIVEEEVIAEEKPKEFTIRVSESEPKPEEPSVEQFTVKKR 15600
15601 KPSVTFADEPATEIVIKESKPAEVVTEDAHIKTKKPKKKVTDVEAEELKI 15650
15651 KITEEVPQEIPILEEVSEEEVITETKKTAPVVEEKTYKIGIKETEPEKPA 15700
15701 EAIVEEEEPVVTEPIEEAPKPEVFEEHKVRVIEETPRELVEEVIEEEVKV 15750
15751 IRRKKPKPEIKEEPEAEVTVSTPKPVEEVEATSSIAVIPEQPTEEEAADL 15800
15801 KITIIEEETPPQELVQEIEEIEIVEEPKAPEEQPTDFTFATKDSEKKPTV 15850
15851 EELPEEQVTIQKKKKKAPVPEVVEEPEAEFLVKPKTPVQEVTEEAKITKS 15900
15901 KKPVKEEEAAAELKVTITEEIPTEPEVQEIIEEIEEIEEEKPAEYVIEVK 15950
15951 ESQPEAVEDKEVSLPKKKPKAPIVEEPEAEITLKPKVKSEEVQEEAKIVK 16000
16001 KKPKKIDEVAVADELTVKVEEEVVPEPIVEEEVIEEFEIKKKPKEPEPED 16050
16051 IVDAAIVKLKKPEPVDADEVVAEVTLKPKAKTEVTEEEFSVDVKLPKEKK 16100
16101 ERPVEIEEEEIIEEAVVIRKKPKKPFEPTVEDLEETEFSLSFKKPHTINE 16150
16151 GVEEAATVLKKRPVKPTTLDEAAAELSIKRQEEEYEEGEDIEEFVVSQQR 16200
16201 KPKPLQITEEDEEAYTVKKLKRRKQVDIPEYADVENVTFRARSTKTKEDV 16250
16251 DQEFNIALDSYAEEEISMSGKVKLKKPIKKTFSEAADEAKIKIIQDFDDG 16300
16301 EEPIIEEIRDDEDTIDEVEEPEEYFVEELPPDEVDFKLKPKKHPKPAYSV 16350
16351 QDEEEEQFLIGIRHPKRDSVTYDEDSLTFKKKRKVVQQLFNEDGASLNIT 16400
16401 REMNVEESENLNIMYSICNYIADNNEAINLVEGEKVTVVGRHSSEWWYVK 16450
16451 KSTTEEEGWVPAQYLMEPEEYAQYVQNKLHEKIDKLPVFERPGPEDKPIA 16500
16501 PRFIEKLQPIHTPDGYTVQFECKVEGNPRPQIAWFRETAIIKPSQDFQMF 16550
16551 YDDDNVATLIIREVFPEDAGQFTVVAKNAAGFTSSTTELIVESPLSDHGS 16600
16601 DATALSRRSMSRESSLADILEGIPPTFSKKPKAQYVDENTNVILECRLVA 16650
16651 VPEPDIVWTFNGEDIDEEEIKNVRIVTESDMHMYCSVVHISKVKKSQEGT 16700
16701 YEVIATNREGEARLPITLKVRTTDKEAPQILEPLRNMVIREGESVVLSTQ 16750
16751 IVGNPPPKVTWYKDGKPVKNAKSDKDLHTLTLITPQKSEKGEYTVKAVNP 16800
16801 LGSVETTANLTIEEPAGGNAEPPLFVERFEEQNVPQKGEIRLPAKVSGNP 16850
16851 VPEVQWLFNNTPLFPSERIQQVYDGENIELIIKDANPETDSGDYKCIASN 16900
16901 PIGKTSHGARVIVEVDEVTFTKKLKKTITIEEVQSLTLECETSHVVTTKW 16950
16951 FFNGKELSGMDHRVVVEDGKTHKLVIRNTNLRDSGTYTCKVKKQETQSTV 17000
17001 EVLQRKPDFIKVLEDYEVTEKDTAILDVELTTEATEVTWYKDGEKITPEN 17050
17051 KNVEFIKDGKARRLVIRDVTIHDEGQYTCKIEGQECSCELVVIELPPEIV 17100
17101 EPLNDVAVTKGENAVFEVELSKGDALVKWFKNGKEIVFNERIQLAIDGKK 17150
17151 QSLRIVKAKPEDVGEYSVQVGEQTSKAKLTVEEPLVDFVIRLPDITLATK 17200
17201 TTDAEFTVQLSQPDVEVTWCKKGKPIKPNQKHEVFVEGTVRRLVIHDASD 17250
17251 EDAGEISCVAENVTSSTKLCVEELKLPPVITSDKDQTIKVKENDDVTFTV 17300
17301 KYTGVPTPEACWTTRKVVIPKSKRTIPTIDEQSAKLTIKKVVDDDEGEYT 17350
17351 VKLVNPVGEAEASLHLVIMRKPTAPGTPQPLEIMHDSITLYWKAPEDDGK 17400
17401 SEIIEYILEYQDVKEEKWTEIRKIKDTTYTISKLKIDTEYVFRSIAVNEV 17450
17451 GPSPPSPLSPPIRLVPKVETKAPSVQEPLQDVVSELDKEVTLSCVFGGIP 17500
17501 EPKVTWKKNGQVFESRSIRYENRVAKYTIEKTTIETEATYTCVATNEKGS 17550
17551 AETSCRLKLQQKPVLEVEDKYLTQKLRTGSILTIPATVRGYPQPTVTWHK 17600
17601 ETIEQKTTKSVTIETTETTSTYTVKKVTREQSGKYKVTATNESGTTYVEC 17650
17651 TVQVIDKPSRPQSLEIKDIKKDSIVLEWTPPVDDGGLDIEKYTLEKCDVQ 17700
17701 NNVWMKVSDFNKDIKSYAVQKLSMNAQYMFRVVAANPIGESEPTESDPVT 17750
17751 ITKKFEKPSPPRGPTTVSGMNDTSFNLAWEPSETDGGSKIIEYIVEIREE 17800
17801 TETTYRSVGVTLGTVTNIHVEKVVRNKGYFFRIYARNEVGTSEAFETTEK 17850
17851 IVLGRKITPPSPPQNLRAPDVTSRSVTLDWEVPARNGGSEITGYCVEKRS 17900
17901 STSTNWTKVITLDAHQLHYTIDNLKEKCEYWFRVSAENEVGLGAPAVTES 17950
17951 ISLKTHASEFILVVRNCGSYTEFGFLKAVPSPPTGPLEARVLAANAHIFE 18000
18001 WGLPESDGGAPLLGYHIAIRDMKKTMWIEVGRVPAGVLKFQIRDLQENHE 18050
18051 YMIRIFAKNEIGLSEPLESEEPYKAMTAGHESLPDEPRTEMSSCNTSSWL 18100
18101 RDHHMDADIHSYARGRLLQRDEYFFRLWAELPKSKKKKSSK 18141
Positively and negatively influencing subsequences are coloured according to the following scale:
(non-nuclear) negative ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| positive (nuclear)
What does the NucPred score mean?
| You have to decide on a NucPred score threshold. Sequences which score greater than or equal to this threshold are predicted to spend some time in the nucleus. Higher thresholds yield fewer predicted nuclear proteins, but these predictions are more accurate (you can have higher confidence in them). The table below gives more details of the performance of NucPred estimated using the sequences it was trained on (by cross-validation). Another benchmark is available in the Bioinformatics 2007 paper. |
| NucPred score threshold | Specificity | Sensitivity |
| see above | fraction of proteins predicted to be nuclear that actually are nuclear | fraction of true nuclear proteins that are predicted (coverage) |
| 0.10 | 0.45 | 0.88 |
| 0.20 | 0.52 | 0.83 |
| 0.30 | 0.57 | 0.77 |
| 0.40 | 0.63 | 0.69 |
| 0.50 | 0.70 | 0.62 |
| 0.60 | 0.71 | 0.53 |
| 0.70 | 0.81 | 0.44 |
| 0.80 | 0.84 | 0.32 |
| 0.90 | 0.88 | 0.21 |
| 1.00 | 1.00 | 0.02 |
| Sequences which score >= 0.8 with NucPred and which
are predicted by PredictNLS to contain an NLS have been shown to be 93% correct with a coverage of 16%. (PredictNLS by itself is 87% correct with 26% coverage on the same data.) |
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