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Next: Tertiary structure Up: Secondary structure Previous: Turns   Contents

Other secondary structures

The lack of organised secondary structure in protein molecules is also important, for example secondary structures are more frequently linked by `unstructured' polypeptide chain than by $\beta $-turns. The terminology is confusing however. Some literature refers to anything which is not helix or strand as `coil' or `random coil' or `loop', thus ignoring the existence of $\beta $-turns, and the fact that loops do not have totally random conformations. Indeed, antibody structures have well defined `canonical' conformations in a number of loops[Chothia et al., 1989].



Copyright Bob MacCallum - DISCLAIMER: this was written in 1997 and may contain out-of-date information.